ClinVar Miner

Submissions for variant NM_018668.5(VPS33B):c.597C>T (p.Cys199=)

gnomAD frequency: 0.01658  dbSNP: rs60198611
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
PreventionGenetics, part of Exact Sciences RCV000242472 SCV000313256 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000344240 SCV000394457 benign Arthrogryposis, renal dysfunction, and cholestasis 1 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000947648 SCV001093834 benign not provided 2024-01-29 criteria provided, single submitter clinical testing
GeneDx RCV000947648 SCV001869519 benign not provided 2020-12-12 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV000344240 SCV002807678 benign Arthrogryposis, renal dysfunction, and cholestasis 1 2021-10-07 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000947648 SCV005295537 benign not provided criteria provided, single submitter not provided

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