ClinVar Miner

Submissions for variant NM_018979.4(WNK1):c.5870G>A (p.Arg1957His)

gnomAD frequency: 0.00006  dbSNP: rs36083875
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001927032 SCV002202729 uncertain significance Neuropathy, hereditary sensory and autonomic, type 2A; Pseudohypoaldosteronism type 2C 2024-10-12 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 2209 of the WNK1 protein (p.Arg2209His). This variant is present in population databases (rs36083875, gnomAD 0.2%). This missense change has been observed in individual(s) with primary distal renal tubular acidosis (PMID: 31949730). This variant is also known as p.R2217H. ClinVar contains an entry for this variant (Variation ID: 1425956). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002361255 SCV002663182 uncertain significance Inborn genetic diseases 2022-03-27 criteria provided, single submitter clinical testing The p.R2209H variant (also known as c.6626G>A), located in coding exon 24 of the WNK1 gene, results from a G to A substitution at nucleotide position 6626. The arginine at codon 2209 is replaced by histidine, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Fulgent Genetics, Fulgent Genetics RCV001927032 SCV002815804 uncertain significance Neuropathy, hereditary sensory and autonomic, type 2A; Pseudohypoaldosteronism type 2C 2022-03-22 criteria provided, single submitter clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV004793614 SCV005408192 uncertain significance not provided 2024-01-19 criteria provided, single submitter clinical testing BS1

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