ClinVar Miner

Submissions for variant NM_020366.4(RPGRIP1):c.2964T>A (p.His988Gln)

gnomAD frequency: 0.00001  dbSNP: rs1883351019
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001872473 SCV002118305 uncertain significance Cone-rod dystrophy 13; Leber congenital amaurosis 6 2021-09-17 criteria provided, single submitter clinical testing This sequence change replaces histidine with glutamine at codon 988 of the RPGRIP1 protein (p.His988Gln). The histidine residue is weakly conserved and there is a small physicochemical difference between histidine and glutamine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with RPGRIP1-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The glutamine amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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