ClinVar Miner

Submissions for variant NM_020461.4(TUBGCP6):c.2473G>A (p.Val825Met)

gnomAD frequency: 0.00011  dbSNP: rs143355923
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001294490 SCV001483370 uncertain significance not provided 2022-07-26 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with methionine, which is neutral and non-polar, at codon 825 of the TUBGCP6 protein (p.Val825Met). This variant is present in population databases (rs143355923, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with TUBGCP6-related conditions. ClinVar contains an entry for this variant (Variation ID: 998607). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002538437 SCV003532248 uncertain significance Inborn genetic diseases 2021-10-12 criteria provided, single submitter clinical testing The c.2473G>A (p.V825M) alteration is located in exon 15 (coding exon 15) of the TUBGCP6 gene. This alteration results from a G to A substitution at nucleotide position 2473, causing the valine (V) at amino acid position 825 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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