ClinVar Miner

Submissions for variant NM_020461.4(TUBGCP6):c.3755T>C (p.Leu1252Ser)

gnomAD frequency: 0.00001  dbSNP: rs199869874
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001227627 SCV001399992 uncertain significance not provided 2023-07-03 criteria provided, single submitter clinical testing ClinVar contains an entry for this variant (Variation ID: 955056). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. This variant has not been reported in the literature in individuals affected with TUBGCP6-related conditions. This variant is present in population databases (rs199869874, gnomAD 0.003%). This sequence change replaces leucine, which is neutral and non-polar, with serine, which is neutral and polar, at codon 1252 of the TUBGCP6 protein (p.Leu1252Ser).
Ambry Genetics RCV002563688 SCV003755409 uncertain significance Inborn genetic diseases 2022-04-25 criteria provided, single submitter clinical testing The c.3755T>C (p.L1252S) alteration is located in exon 16 (coding exon 16) of the TUBGCP6 gene. This alteration results from a T to C substitution at nucleotide position 3755, causing the leucine (L) at amino acid position 1252 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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