Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Labcorp Genetics |
RCV000505292 | SCV001219218 | uncertain significance | Gamma-aminobutyric acid transaminase deficiency | 2020-02-10 | criteria provided, single submitter | clinical testing | In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). This variant has been observed as homozygous in an individual affected with early infantile-onset encephalopathy (PMID: 28411234). ClinVar contains an entry for this variant (Variation ID: 438389). This variant is not present in population databases (ExAC no frequency). This sequence change replaces arginine with tryptophan at codon 377 of the ABAT protein (p.Arg377Trp). The arginine residue is highly conserved and there is a moderate physicochemical difference between arginine and tryptophan. |
OMIM | RCV000505292 | SCV000599473 | pathogenic | Gamma-aminobutyric acid transaminase deficiency | 2023-10-25 | no assertion criteria provided | literature only |