ClinVar Miner

Submissions for variant NM_020754.4(ARHGAP31):c.848T>A (p.Leu283His)

gnomAD frequency: 0.00006  dbSNP: rs773314411
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV003011486 SCV003299561 uncertain significance not provided 2023-01-21 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals affected with ARHGAP31-related conditions. This variant is present in population databases (rs773314411, gnomAD 0.007%). This sequence change replaces leucine, which is neutral and non-polar, with histidine, which is basic and polar, at codon 283 of the ARHGAP31 protein (p.Leu283His).
Ambry Genetics RCV003358044 SCV004064620 likely benign Inborn genetic diseases 2023-08-21 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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