ClinVar Miner

Submissions for variant NM_020937.4(FANCM):c.3854A>G (p.His1285Arg)

gnomAD frequency: 0.00001  dbSNP: rs749696321
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001038271 SCV001201735 uncertain significance Fanconi anemia 2023-04-06 criteria provided, single submitter clinical testing This variant is present in population databases (rs749696321, gnomAD 0.004%). This sequence change replaces histidine, which is basic and polar, with arginine, which is basic and polar, at codon 1285 of the FANCM protein (p.His1285Arg). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant  is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. ClinVar contains an entry for this variant (Variation ID: 837024). This variant has not been reported in the literature in individuals affected with FANCM-related conditions.
Quest Diagnostics Nichols Institute San Juan Capistrano RCV002479246 SCV002774583 uncertain significance not provided 2021-08-06 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002505560 SCV002816509 uncertain significance Spermatogenic failure 28; Premature ovarian failure 15 2022-05-10 criteria provided, single submitter clinical testing
Ambry Genetics RCV002551411 SCV003666622 uncertain significance Inborn genetic diseases 2022-12-15 criteria provided, single submitter clinical testing The c.3854A>G (p.H1285R) alteration is located in exon 14 (coding exon 14) of the FANCM gene. This alteration results from a A to G substitution at nucleotide position 3854, causing the histidine (H) at amino acid position 1285 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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