ClinVar Miner

Submissions for variant NM_020975.6(RET):c.108C>T (p.Tyr36=)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003533999 SCV004363970 likely benign Multiple endocrine neoplasia, type 2 2023-12-14 criteria provided, single submitter clinical testing
Ambry Genetics RCV004366494 SCV005028254 likely benign Hereditary cancer-predisposing syndrome 2023-12-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV004801356 SCV005422024 likely benign not specified 2024-10-28 criteria provided, single submitter clinical testing Variant summary: RET c.108C>T alters a non-conserved nucleotide resulting in a synonymous change. Consensus agreement among computation tools predict no significant impact on normal splicing. However, these predictions have yet to be confirmed by functional studies. The variant was absent in 249308 control chromosomes. The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. To our knowledge, no occurrence of c.108C>T in individuals affected with Hirschsprung Disease and no experimental evidence demonstrating its impact on protein function have been reported. ClinVar contains an entry for this variant (Variation ID: 2703074). Based on the evidence outlined above, the variant was classified as likely benign.

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