ClinVar Miner

Submissions for variant NM_020975.6(RET):c.2870C>T (p.Pro957Leu)

gnomAD frequency: 0.00002  dbSNP: rs1259087541
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000654564 SCV000776458 uncertain significance Multiple endocrine neoplasia, type 2 2024-12-10 criteria provided, single submitter clinical testing This sequence change replaces proline, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 957 of the RET protein (p.Pro957Leu). This variant is present in population databases (no rsID available, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with RET-related conditions. ClinVar contains an entry for this variant (Variation ID: 543731). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002440386 SCV002747068 uncertain significance Hereditary cancer-predisposing syndrome 2024-10-29 criteria provided, single submitter clinical testing The p.P957L variant (also known as c.2870C>T), located in coding exon 17 of the RET gene, results from a C to T substitution at nucleotide position 2870. The proline at codon 957 is replaced by leucine, an amino acid with similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Baylor Genetics RCV003459552 SCV004208724 uncertain significance Hirschsprung disease, susceptibility to, 1 2023-08-02 criteria provided, single submitter clinical testing

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