ClinVar Miner

Submissions for variant NM_021098.3(CACNA1H):c.3742G>A (p.Asp1248Asn)

gnomAD frequency: 0.00019  dbSNP: rs552269381
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000540966 SCV000632143 uncertain significance Idiopathic generalized epilepsy; Hyperaldosteronism, familial, type IV 2023-12-11 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid, which is acidic and polar, with asparagine, which is neutral and polar, at codon 1248 of the CACNA1H protein (p.Asp1248Asn). This variant is present in population databases (rs552269381, gnomAD 0.07%), and has an allele count higher than expected for a pathogenic variant. This variant has not been reported in the literature in individuals affected with CACNA1H-related conditions. ClinVar contains an entry for this variant (Variation ID: 460097). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002506314 SCV002816030 uncertain significance Epilepsy, childhood absence, susceptibility to, 6; Hyperaldosteronism, familial, type IV 2022-04-13 criteria provided, single submitter clinical testing
Ambry Genetics RCV003159778 SCV003872846 uncertain significance Inborn genetic diseases 2023-02-06 criteria provided, single submitter clinical testing The c.3742G>A (p.D1248N) alteration is located in exon 17 (coding exon 16) of the CACNA1H gene. This alteration results from a G to A substitution at nucleotide position 3742, causing the aspartic acid (D) at amino acid position 1248 to be replaced by an asparagine (N). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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