ClinVar Miner

Submissions for variant NM_022124.6(CDH23):c.3248C>T (p.Thr1083Met)

gnomAD frequency: 0.00005  dbSNP: rs756165682
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001046321 SCV001210218 uncertain significance not provided 2022-07-26 criteria provided, single submitter clinical testing This sequence change replaces threonine, which is neutral and polar, with methionine, which is neutral and non-polar, at codon 1083 of the CDH23 protein (p.Thr1083Met). This variant is present in population databases (rs756165682, gnomAD 0.03%). This variant has not been reported in the literature in individuals affected with CDH23-related conditions. ClinVar contains an entry for this variant (Variation ID: 843647). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Not Available"; Align-GVGD: "Class C65"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Natera, Inc. RCV001272557 SCV001454649 uncertain significance Usher syndrome type 1 2020-03-17 no assertion criteria provided clinical testing

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