ClinVar Miner

Submissions for variant NM_022124.6(CDH23):c.6026T>A (p.Leu2009His)

gnomAD frequency: 0.00025  dbSNP: rs201067092
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000039233 SCV000062917 uncertain significance not specified 2016-06-02 criteria provided, single submitter clinical testing The p.Leu2009His variant in CDH23 has been reported in 1 individual with profoun d sensorineural hearing loss who was heterozygous for two pathogenic variants in another gene that likely explained the hearing loss (LMM data). This variant ha s been identified in 7/9042 African chromosomes by the Exome Aggregation Consort ium (ExAC, http://exac.broadinstitute.org; dbSNP rs201067092). Although this var iant has been seen in the general population, its frequency is not high enough t o rule out a pathogenic role. Computational prediction tools and conservation an alyses suggest that this variant may impact the protein, though this information is not predictive enough to determine pathogenicity. In summary, the clinical s ignificance of the p.Leu2009His variant is uncertain.
Invitae RCV002513531 SCV003448171 likely benign not provided 2023-12-31 criteria provided, single submitter clinical testing
Natera, Inc. RCV001826576 SCV002092576 uncertain significance Usher syndrome type 1 2019-10-28 no assertion criteria provided clinical testing

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