ClinVar Miner

Submissions for variant NM_022173.4(TIA1):c.683A>T (p.Gln228Leu)

gnomAD frequency: 0.00001  dbSNP: rs763253859
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001347706 SCV001541979 uncertain significance Welander distal myopathy 2023-08-01 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt TIA1 protein function. ClinVar contains an entry for this variant (Variation ID: 1043578). This variant has not been reported in the literature in individuals affected with TIA1-related conditions. This variant is present in population databases (rs763253859, gnomAD 0.01%). This sequence change replaces glutamine, which is neutral and polar, with leucine, which is neutral and non-polar, at codon 228 of the TIA1 protein (p.Gln228Leu).
GeneDx RCV003156340 SCV003845551 uncertain significance not provided 2023-03-21 criteria provided, single submitter clinical testing In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: 30982635)

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