ClinVar Miner

Submissions for variant NM_022725.4(FANCF):c.89C>G (p.Thr30Ser)

dbSNP: rs370347668
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001365229 SCV001561492 uncertain significance Fanconi anemia 2022-01-17 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 1056405). This variant has not been reported in the literature in individuals affected with FANCF-related conditions. This variant is present in population databases (rs370347668, gnomAD 0.005%). This sequence change replaces threonine, which is neutral and polar, with serine, which is neutral and polar, at codon 30 of the FANCF protein (p.Thr30Ser).
Fulgent Genetics, Fulgent Genetics RCV002504599 SCV002816027 uncertain significance Fanconi anemia complementation group F 2021-08-27 criteria provided, single submitter clinical testing
Ambry Genetics RCV004036935 SCV004869866 uncertain significance Inborn genetic diseases 2024-02-21 criteria provided, single submitter clinical testing The c.89C>G (p.T30S) alteration is located in exon 1 (coding exon 1) of the FANCF gene. This alteration results from a C to G substitution at nucleotide position 89, causing the threonine (T) at amino acid position 30 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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