ClinVar Miner

Submissions for variant NM_024301.5(FKRP):c.1210C>T (p.Arg404Cys)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Baylor Genetics RCV003468199 SCV004197426 pathogenic Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 2023-05-31 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV004526987 SCV005039209 uncertain significance not specified 2024-03-22 criteria provided, single submitter clinical testing Variant summary: FKRP c.1210C>T (p.Arg404Cys) results in a non-conservative amino acid change in the encoded protein sequence. Five of five in-silico tools predict a damaging effect of the variant on protein function. The frequency data for this variant in gnomAD (v2.1 dataset) is considered unreliable, as metrics indicate poor data quality at this position. The variant, c.1210C>T, has been reported in the literature in a compound heterozygous individual affected with Limb-Girdle Muscular Dystrophy, who carried a 2nd pathogenic variant (Mercuri_2006, Sframeli_2017, Manzini_2008). These data do not allow any conclusion about variant significance. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 16476814, 28688748, 18752264). ClinVar contains an entry for this variant (Variation ID: 2675700). Based on the evidence outlined above, the variant was classified as uncertain significance.
Fulgent Genetics, Fulgent Genetics RCV005030039 SCV005647993 likely pathogenic Muscular dystrophy-dystroglycanopathy type B5; Autosomal recessive limb-girdle muscular dystrophy type 2I; Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 2024-03-26 criteria provided, single submitter clinical testing

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