ClinVar Miner

Submissions for variant NM_024422.6(DSC2):c.1559T>C (p.Ile520Thr)

gnomAD frequency: 0.00029  dbSNP: rs561310777
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000553381 SCV000644993 likely benign Arrhythmogenic right ventricular dysplasia 11 2023-10-24 criteria provided, single submitter clinical testing
CHEO Genetics Diagnostic Laboratory, Children's Hospital of Eastern Ontario RCV000770537 SCV000901984 benign Cardiomyopathy 2017-10-19 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000553381 SCV001288110 uncertain significance Arrhythmogenic right ventricular dysplasia 11 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Color Diagnostics, LLC DBA Color Health RCV000770537 SCV001347319 likely benign Cardiomyopathy 2018-11-16 criteria provided, single submitter clinical testing
GeneDx RCV001568859 SCV001792802 uncertain significance not provided 2019-03-26 criteria provided, single submitter clinical testing Has not been previously published as pathogenic or benign to our knowledge; Reported in ClinVar but additional evidence is not available (ClinVar Variant ID# 155783; Landrum et al., 2016); In silico analysis, which includes protein predictors and evolutionary conservation, supports a deleterious effect
Ambry Genetics RCV002399511 SCV002704940 likely benign Cardiovascular phenotype 2019-12-26 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Blueprint Genetics RCV000143880 SCV000188749 likely benign Primary dilated cardiomyopathy 2014-06-18 no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV001568859 SCV001978108 likely benign not provided no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV001568859 SCV001979488 likely benign not provided no assertion criteria provided clinical testing

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