ClinVar Miner

Submissions for variant NM_024529.5(CDC73):c.1460C>T (p.Pro487Leu)

dbSNP: rs1678015855
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001229994 SCV001402459 uncertain significance Parathyroid carcinoma 2019-11-11 criteria provided, single submitter clinical testing This sequence change replaces proline with leucine at codon 487 of the CDC73 protein (p.Pro487Leu). The proline residue is moderately conserved and there is a moderate physicochemical difference between proline and leucine. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with CDC73-related conditions. This variant is not present in population databases (ExAC no frequency).
Ambry Genetics RCV004951372 SCV005553803 uncertain significance Hereditary cancer-predisposing syndrome 2024-09-04 criteria provided, single submitter clinical testing The p.P487L variant (also known as c.1460C>T), located in coding exon 16 of the CDC73 gene, results from a C to T substitution at nucleotide position 1460. The proline at codon 487 is replaced by leucine, an amino acid with similar properties. This amino acid position is conserved. In addition, the in silico prediction for this alteration is inconclusive. Based on the available evidence, the clinical significance of this variant remains unclear.

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