ClinVar Miner

Submissions for variant NM_024529.5(CDC73):c.382G>A (p.Ala128Thr)

gnomAD frequency: 0.00001  dbSNP: rs756584058
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000684882 SCV000812343 uncertain significance Parathyroid carcinoma 2024-12-03 criteria provided, single submitter clinical testing This sequence change replaces alanine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 128 of the CDC73 protein (p.Ala128Thr). This variant is present in population databases (rs756584058, gnomAD 0.0009%). This variant has not been reported in the literature in individuals affected with CDC73-related conditions. ClinVar contains an entry for this variant (Variation ID: 565343). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt CDC73 protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002352106 SCV002619826 uncertain significance Hereditary cancer-predisposing syndrome 2024-02-15 criteria provided, single submitter clinical testing The p.A128T variant (also known as c.382G>A), located in coding exon 5 of the CDC73 gene, results from a G to A substitution at nucleotide position 382. The alanine at codon 128 is replaced by threonine, an amino acid with similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this alteration remains unclear.

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