ClinVar Miner

Submissions for variant NM_024685.4(BBS10):c.1804G>C (p.Val602Leu)

gnomAD frequency: 0.00001  dbSNP: rs778431173
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001067371 SCV001232429 pathogenic Bardet-Biedl syndrome 2023-11-28 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 602 of the BBS10 protein (p.Val602Leu). This variant is present in population databases (rs778431173, gnomAD 0.0009%). This missense change has been observed in individual(s) with Bardet-Biedl syndrome (PMID: 21209035, 22410627; Invitae). In at least one individual the data is consistent with being in trans (on the opposite chromosome) from a pathogenic variant. ClinVar contains an entry for this variant (Variation ID: 860963). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt BBS10 protein function with a positive predictive value of 80%. For these reasons, this variant has been classified as Pathogenic.
Baylor Genetics RCV003462601 SCV004217418 pathogenic Bardet-Biedl syndrome 10 2023-10-11 criteria provided, single submitter clinical testing
Advanced Center For Translational And Genetic Medicine, Ann & Robert H. Lurie Children's Hospital Of Chicago RCV003229015 SCV003926579 likely pathogenic Bardet-Biedl syndrome 1 2023-05-10 no assertion criteria provided research

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