ClinVar Miner

Submissions for variant NM_024753.5(TTC21B):c.3668G>T (p.Cys1223Phe)

gnomAD frequency: 0.00001  dbSNP: rs1225739712
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001952270 SCV002193956 uncertain significance Jeune thoracic dystrophy; Nephronophthisis 2022-07-19 criteria provided, single submitter clinical testing Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 1418750). This variant has not been reported in the literature in individuals affected with TTC21B-related conditions. This variant is present in population databases (no rsID available, gnomAD 0.007%). This sequence change replaces cysteine, which is neutral and slightly polar, with phenylalanine, which is neutral and non-polar, at codon 1223 of the TTC21B protein (p.Cys1223Phe). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002507044 SCV002816476 uncertain significance Asphyxiating thoracic dystrophy 4; Nephronophthisis 12 2022-04-19 criteria provided, single submitter clinical testing
Ambry Genetics RCV004043632 SCV004972693 uncertain significance Inborn genetic diseases 2023-11-17 criteria provided, single submitter clinical testing The c.3668G>T (p.C1223F) alteration is located in exon 26 (coding exon 26) of the TTC21B gene. This alteration results from a G to T substitution at nucleotide position 3668, causing the cysteine (C) at amino acid position 1223 to be replaced by a phenylalanine (F). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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