ClinVar Miner

Submissions for variant NM_025099.6(CTC1):c.1760A>G (p.Asn587Ser)

gnomAD frequency: 0.00015  dbSNP: rs376302717
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000692838 SCV000820682 uncertain significance Dyskeratosis congenita 2023-11-27 criteria provided, single submitter clinical testing This sequence change replaces asparagine, which is neutral and polar, with serine, which is neutral and polar, at codon 587 of the CTC1 protein (p.Asn587Ser). This variant is present in population databases (rs376302717, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with CTC1-related conditions. ClinVar contains an entry for this variant (Variation ID: 571638). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt CTC1 protein function with a positive predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003352988 SCV004076942 uncertain significance Inborn genetic diseases 2023-06-16 criteria provided, single submitter clinical testing The c.1760A>G (p.N587S) alteration is located in exon 10 (coding exon 10) of the CTC1 gene. This alteration results from a A to G substitution at nucleotide position 1760, causing the asparagine (N) at amino acid position 587 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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