ClinVar Miner

Submissions for variant NM_025132.4(WDR19):c.2674G>A (p.Val892Ile)

gnomAD frequency: 0.00002  dbSNP: rs551049157
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001306476 SCV001495850 uncertain significance Asphyxiating thoracic dystrophy 5; Senior-Loken syndrome 8 2022-07-26 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 892 of the WDR19 protein (p.Val892Ile). This variant is present in population databases (rs551049157, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with WDR19-related conditions. ClinVar contains an entry for this variant (Variation ID: 1009042). Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The isoleucine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003166743 SCV003888265 uncertain significance Inborn genetic diseases 2023-02-15 criteria provided, single submitter clinical testing The c.2674G>A (p.V892I) alteration is located in exon 24 (coding exon 24) of the WDR19 gene. This alteration results from a G to A substitution at nucleotide position 2674, causing the valine (V) at amino acid position 892 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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