ClinVar Miner

Submissions for variant NM_025132.4(WDR19):c.3383T>C (p.Val1128Ala)

gnomAD frequency: 0.00005  dbSNP: rs372799054
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000526409 SCV000656616 uncertain significance Asphyxiating thoracic dystrophy 5; Senior-Loken syndrome 8 2022-10-23 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with alanine, which is neutral and non-polar, at codon 1128 of the WDR19 protein (p.Val1128Ala). This variant is present in population databases (rs372799054, gnomAD 0.008%). This variant has not been reported in the literature in individuals affected with WDR19-related conditions. ClinVar contains an entry for this variant (Variation ID: 476157). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on WDR19 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004024355 SCV004981143 uncertain significance Inborn genetic diseases 2023-10-13 criteria provided, single submitter clinical testing The c.3383T>C (p.V1128A) alteration is located in exon 31 (coding exon 31) of the WDR19 gene. This alteration results from a T to C substitution at nucleotide position 3383, causing the valine (V) at amino acid position 1128 to be replaced by an alanine (A). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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