ClinVar Miner

Submissions for variant NM_025137.3(SPG11):c.(?_-1)_3520+?del

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000168058 SCV000218711 likely pathogenic Hereditary spastic paraplegia 11 2014-10-15 criteria provided, single submitter clinical testing This sequence change is a gross deletion of the genomic region encompassing exons 1-20 (c.1_3520del) of the SPG11 gene. The initiator methionine for the SPG11 mRNA is located within exon 1 and this deletion extends to the edge of the assayed region. Therefore, the 5' boundary of this event is not known. This gross deletion is predicted to eliminate the initiator methionine and the first 1173 amino acids of the SPG11 protein (p.Met1_Gly1173del). Multiple pathogenic missense changes have been reported in the first 20 exons (PMID: 23881933) and out-of-frame gross deletions encompassing exons 8 and 20 have been reported in families with hereditary spastic paraplegia (PMID: 23733235, 24451228). For these reasons, this exon 1-20 deletion has been classified as Likely Pathogenic.

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