ClinVar Miner

Submissions for variant NM_025216.3(WNT10A):c.982_986dup (p.Arg330fs)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003056185 SCV003348636 pathogenic Odonto-onycho-dermal dysplasia; Tooth agenesis, selective, 4 2022-05-09 criteria provided, single submitter clinical testing This sequence change results in a frameshift in the WNT10A gene (p.Arg330Alafs*110). While this is not anticipated to result in nonsense mediated decay, it is expected to disrupt the last 88 amino acid(s) of the WNT10A protein and extend the protein by 21 additional amino acid residues. This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with WNT10A-related conditions. This variant disrupts a region of the WNT10A protein in which other variant(s) (p.Glu390*) have been determined to be pathogenic (PMID: 24902757; Invitae). This suggests that this is a clinically significant region of the protein, and that variants that disrupt it are likely to be disease-causing. For these reasons, this variant has been classified as Pathogenic.

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