ClinVar Miner

Submissions for variant NM_030665.4(RAI1):c.5626dup (p.His1876fs)

dbSNP: rs2543642941
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003479608 SCV004223075 pathogenic Smith-Magenis syndrome 2023-11-21 criteria provided, single submitter clinical testing Variant summary: RAI1 c.5626dupC (p.His1876ProfsX28) results in a premature termination codon, predicted to cause a truncation of the encoded protein or absence of the protein due to nonsense mediated decay, which are commonly known mechanisms for disease. The frequency data for this variant in gnomAD is considered unreliable, as metrics indicate poor data quality at this position. To our knowledge, no occurrence of c.5626dupC in individuals affected with Smith-Magenis Syndrome and no experimental evidence demonstrating its impact on protein function have been reported. No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as pathogenic.

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