ClinVar Miner

Submissions for variant NM_031443.4(CCM2):c.556G>A (p.Ala186Thr)

gnomAD frequency: 0.00002  dbSNP: rs758091168
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001896617 SCV002177077 uncertain significance Cerebral cavernous malformation 2 2023-07-16 criteria provided, single submitter clinical testing This sequence change replaces alanine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 186 of the CCM2 protein (p.Ala186Thr). This variant is present in population databases (rs758091168, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with CCM2-related conditions. ClinVar contains an entry for this variant (Variation ID: 1400213). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt CCM2 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004041734 SCV005029119 uncertain significance Inborn genetic diseases 2023-11-26 criteria provided, single submitter clinical testing The p.A186T variant (also known as c.556G>A), located in coding exon 5 of the CCM2 gene, results from a G to A substitution at nucleotide position 556. The alanine at codon 186 is replaced by threonine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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