ClinVar Miner

Submissions for variant NM_032043.3(BRIP1):c.929G>A (p.Cys310Tyr)

dbSNP: rs1567832184
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000780063 SCV000917085 uncertain significance not specified 2018-09-14 criteria provided, single submitter clinical testing Variant summary: BRIP1 c.929G>A (p.Cys310Tyr) results in a non-conservative amino acid change located in the Helicase superfamily 1/2, ATP-binding domain of the encoded protein sequence. Four of four in-silico tools predict a damaging effect of the variant on protein function. The variant was absent in 245766 control chromosomes. The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. To our knowledge, no occurrence of c.929G>A in individuals affected with Hereditary Breast and Ovarian Cancer and no experimental evidence demonstrating its impact on protein function have been reported. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as uncertain significance.
Labcorp Genetics (formerly Invitae), Labcorp RCV001856182 SCV002163506 uncertain significance Familial cancer of breast; Fanconi anemia complementation group J 2021-08-26 criteria provided, single submitter clinical testing This sequence change replaces cysteine with tyrosine at codon 310 of the BRIP1 protein (p.Cys310Tyr). The cysteine residue is highly conserved and there is a large physicochemical difference between cysteine and tyrosine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with BRIP1-related conditions. ClinVar contains an entry for this variant (Variation ID: 632725). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Baylor Genetics RCV003461052 SCV004217073 uncertain significance Familial cancer of breast 2023-06-26 criteria provided, single submitter clinical testing

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