Total submissions: 3
| Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
|---|---|---|---|---|---|---|---|---|
| Laboratory for Molecular Medicine, |
RCV000039517 | SCV000063206 | likely benign | not specified | 2012-08-28 | criteria provided, single submitter | clinical testing | Pro4196Ser in Exon 62 of GPR98: This variant has not been reported in the litera ture nor previously identified by our laboratory. However, computational analyse s (biochemical amino acid properties, conservation, AlignGVGD, PolyPhen2, and SI FT) suggest that the Pro4196Ser variant may not impact the protein. In particula r, this variant occurs in another mammal (shrew) despite nearby conservation. Th erefore, this variant is likely benign. |
| Invitae | RCV001042748 | SCV001206449 | likely benign | not provided | 2024-01-29 | criteria provided, single submitter | clinical testing | |
| Illumina Laboratory Services, |
RCV001157422 | SCV001318990 | uncertain significance | Usher syndrome type 2C | 2018-01-13 | criteria provided, single submitter | clinical testing | This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease. |