ClinVar Miner

Submissions for variant NM_032119.4(ADGRV1):c.14320C>T (p.Leu4774Phe)

gnomAD frequency: 0.00015  dbSNP: rs200685818
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV001157525 SCV001319113 uncertain significance Usher syndrome type 2C 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV001316471 SCV001507095 likely benign not provided 2024-09-10 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002483902 SCV002790767 uncertain significance Usher syndrome type 2C; Febrile seizures, familial, 4 2022-01-10 criteria provided, single submitter clinical testing
Ambry Genetics RCV002557347 SCV003732686 uncertain significance Inborn genetic diseases 2022-06-09 criteria provided, single submitter clinical testing The c.14320C>T (p.L4774F) alteration is located in exon 70 (coding exon 70) of the ADGRV1 gene. This alteration results from a C to T substitution at nucleotide position 14320, causing the leucine (L) at amino acid position 4774 to be replaced by a phenylalanine (F). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003994221 SCV004813291 uncertain significance not specified 2024-02-08 criteria provided, single submitter clinical testing Variant summary: ADGRV1 c.14320C>T (p.Leu4774Phe) results in a non-conservative amino acid change in the encoded protein sequence. Four of five in-silico tools predict a benign effect of the variant on protein function. The variant allele was found at a frequency of 2.4e-05 in 248922 control chromosomes. The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. To our knowledge, no occurrence of c.14320C>T in individuals affected with ADGRV1-Related Disorders and no experimental evidence demonstrating its impact on protein function have been reported. ClinVar contains an entry for this variant (Variation ID: 907577). Based on the evidence outlined above, the variant was classified as uncertain significance.

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