ClinVar Miner

Submissions for variant NM_032380.5(GFM2):c.1636C>T (p.Arg546Ter)

gnomAD frequency: 0.00003  dbSNP: rs780691008
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002929075 SCV003277916 uncertain significance not provided 2022-01-20 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Arg546*) in the GFM2 gene. It is expected to result in an absent or disrupted protein product. However, the current clinical and genetic evidence is not sufficient to establish whether loss-of-function variants in GFM2 cause disease. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with GFM2-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneDx RCV002929075 SCV005626684 pathogenic not provided 2024-07-11 criteria provided, single submitter clinical testing Nonsense variant predicted to result in protein truncation or nonsense mediated decay in a gene for which loss of function is a known mechanism of disease; Not observed at significant frequency in large population cohorts (gnomAD); Has not been previously published as pathogenic or benign to our knowledge

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