ClinVar Miner

Submissions for variant NM_032444.4(SLX4):c.2053G>A (p.Val685Ile)

gnomAD frequency: 0.00011  dbSNP: rs371002922
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001919304 SCV002189904 uncertain significance Fanconi anemia 2022-06-18 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 685 of the SLX4 protein (p.Val685Ile). This variant is present in population databases (rs371002922, gnomAD 0.03%). This variant has not been reported in the literature in individuals affected with SLX4-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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