ClinVar Miner

Submissions for variant NM_032444.4(SLX4):c.3162G>A (p.Ser1054=)

gnomAD frequency: 0.03405  dbSNP: rs76488917
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
PreventionGenetics, part of Exact Sciences RCV000253485 SCV000314932 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001094288 SCV000396845 benign Fanconi anemia complementation group P 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Invitae RCV000371587 SCV000558655 benign Fanconi anemia 2024-02-01 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000253485 SCV000605211 benign not specified 2017-04-04 criteria provided, single submitter clinical testing
GeneDx RCV001706371 SCV001887282 benign not provided 2019-02-28 criteria provided, single submitter clinical testing
KCCC/NGS Laboratory, Kuwait Cancer Control Center RCV001094288 SCV004015461 benign Fanconi anemia complementation group P 2023-07-07 criteria provided, single submitter clinical testing
Leiden Open Variation Database RCV000253485 SCV001364657 likely benign not specified 2012-08-31 no assertion criteria provided curation Curator: Arleen D. Auerbach. Submitter to LOVD: Janine Bakker.

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