ClinVar Miner

Submissions for variant NM_032578.4(MYPN):c.2156G>C (p.Ser719Thr)

gnomAD frequency: 0.00003  dbSNP: rs780584298
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000705895 SCV000834912 uncertain significance Dilated cardiomyopathy 1KK 2022-12-02 criteria provided, single submitter clinical testing ClinVar contains an entry for this variant (Variation ID: 581938). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The threonine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. This variant has not been reported in the literature in individuals affected with MYPN-related conditions. This variant is present in population databases (rs780584298, gnomAD 0.02%). This sequence change replaces serine, which is neutral and polar, with threonine, which is neutral and polar, at codon 719 of the MYPN protein (p.Ser719Thr).
Ambry Genetics RCV004985092 SCV005459008 uncertain significance Cardiovascular phenotype 2024-10-15 criteria provided, single submitter clinical testing The p.S719T variant (also known as c.2156G>C), located in coding exon 10 of the MYPN gene, results from a G to C substitution at nucleotide position 2156. The serine at codon 719 is replaced by threonine, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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