ClinVar Miner

Submissions for variant NM_033028.5(BBS4):c.514dup (p.Ile172fs)

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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002638103 SCV003521479 pathogenic Bardet-Biedl syndrome 2023-07-19 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 2200217). This variant is also known as c.515dupA. This premature translational stop signal has been observed in individual(s) with BBS4-related conditions (PMID: 23591405). This variant is present in population databases (rs779047261, gnomAD 0.02%). This sequence change creates a premature translational stop signal (p.Ile172Asnfs*18) in the BBS4 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in BBS4 are known to be pathogenic (PMID: 11381270, 12016587, 20177705, 27894351).
Baylor Genetics RCV003459768 SCV004214075 pathogenic Bardet-Biedl syndrome 4 2024-02-21 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV003459768 SCV005630880 pathogenic Bardet-Biedl syndrome 4 2024-06-05 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004750304 SCV005344449 likely pathogenic BBS4-related disorder 2024-07-15 no assertion criteria provided clinical testing The BBS4 c.514dupA variant is predicted to result in a frameshift and premature protein termination (p.Ile172Asnfs*18). This variant was reported in an individual with Bardet-Biedl syndrome (referred to as c.515dupA, p.I172NfsX18 in Supplementary Table 1, Glöckle et al. 2014. PubMed ID: 23591405). This variant is reported in 0.020% of alleles in individuals of Ashkenazi Jewish descent in gnomAD. Frameshift variants in BBS4 are expected to be pathogenic. This variant is interpreted as likely pathogenic.

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