Total submissions: 1
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Sydney Genome Diagnostics, |
RCV001328140 | SCV001449303 | likely pathogenic | Alport syndrome | 2019-08-16 | no assertion criteria provided | clinical testing | This individual is heterozygous for the c.1532del variant in the COL4A5 gene. This frameshifting variant is predicted to create a premature stop codon p.(Pro511Leufs*46) and may result in a null allele due to nonsense-mediated mRNA decay. The variant has not been reported in any population databases (i.e. gnomAD, ExAC, ESP or dbSNP). To our knowledge, this variant has not been previously reported in the literature or any disease specific databases. However, other truncating variants downstream of this amino acid have been described in the literature Alport (COL4A5) database (http://www.arup.utah.edu/database/ALPORT/ALPORT_display.php). This variant is considered to be likely pathogenic according to the ACMG guidelines (Evidence used: PVS1, PM2). |