ClinVar Miner

Submissions for variant NM_052874.5(STX1B):c.394G>T (p.Glu132Ter)

dbSNP: rs1567378099
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000760947 SCV000890843 likely pathogenic not provided 2020-02-08 criteria provided, single submitter clinical testing Nonsense variant predicted to result in protein truncation or nonsense mediated decay in a gene for which loss-of-function is a known mechanism of disease; Not observed in large population cohorts (Lek et al., 2016); Has not been previously published as pathogenic or benign to our knowledge
Labcorp Genetics (formerly Invitae), Labcorp RCV002533855 SCV003228968 pathogenic Generalized epilepsy with febrile seizures plus, type 9 2022-09-18 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Glu132*) in the STX1B gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in STX1B are known to be pathogenic (PMID: 25362483). For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 620559). This variant has not been reported in the literature in individuals affected with STX1B-related conditions. This variant is not present in population databases (gnomAD no frequency).

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.