ClinVar Miner

Submissions for variant NM_052989.3(IFT122):c.1591G>A (p.Val531Met)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002907812 SCV003243925 uncertain significance Cranioectodermal dysplasia 1 2022-03-27 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals affected with IFT122-related conditions. This variant is present in population databases (rs779410469, gnomAD 0.003%). This sequence change replaces valine, which is neutral and non-polar, with methionine, which is neutral and non-polar, at codon 582 of the IFT122 protein (p.Val582Met).
Ambry Genetics RCV003348924 SCV004066569 uncertain significance Inborn genetic diseases 2023-08-22 criteria provided, single submitter clinical testing The c.1744G>A (p.V582M) alteration is located in exon 15 (coding exon 15) of the IFT122 gene. This alteration results from a G to A substitution at nucleotide position 1744, causing the valine (V) at amino acid position 582 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Fulgent Genetics, Fulgent Genetics RCV002907812 SCV005659566 uncertain significance Cranioectodermal dysplasia 1 2024-03-29 criteria provided, single submitter clinical testing

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