ClinVar Miner

Submissions for variant NM_058216.3(RAD51C):c.145G>A (p.Glu49Lys)

dbSNP: rs753709131
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000482039 SCV000573285 uncertain significance not provided 2023-09-22 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Has not been previously published as pathogenic or benign to our knowledge
Invitae RCV001219660 SCV001391610 uncertain significance Fanconi anemia complementation group O 2022-10-27 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Variants that disrupt the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 423572). This variant has not been reported in the literature in individuals affected with RAD51C-related conditions. This variant is present in population databases (rs753709131, gnomAD 0.006%). This sequence change replaces glutamic acid, which is acidic and polar, with lysine, which is basic and polar, at codon 49 of the RAD51C protein (p.Glu49Lys). This variant also falls at the last nucleotide of exon 1, which is part of the consensus splice site for this exon.

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