ClinVar Miner

Submissions for variant NM_133433.4(NIPBL):c.1392T>A (p.Pro464=)

gnomAD frequency: 0.00001  dbSNP: rs555179389
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000724488 SCV000233179 uncertain significance not provided 2015-02-17 criteria provided, single submitter clinical testing
GeneDx RCV000180699 SCV000719098 likely benign not specified 2017-05-05 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Illumina Laboratory Services, Illumina RCV001153202 SCV001314474 likely benign Cornelia de Lange syndrome 1 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Genome-Nilou Lab RCV001153202 SCV002054173 likely benign Cornelia de Lange syndrome 1 2021-07-15 criteria provided, single submitter clinical testing
Invitae RCV001153202 SCV002458444 benign Cornelia de Lange syndrome 1 2022-06-13 criteria provided, single submitter clinical testing

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