ClinVar Miner

Submissions for variant NM_138694.4(PKHD1):c.10744G>T (p.Glu3582Ter)

dbSNP: rs148300854
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000781724 SCV000919993 likely pathogenic Autosomal recessive polycystic kidney disease 2018-02-26 criteria provided, single submitter clinical testing Variant summary: PKHD1 c.10744G>T (p.Glu3582X) results in a premature termination codon, predicted to cause a truncation of the encoded protein or absence of the protein due to nonsense mediated decay, which are commonly known mechanisms for disease. A truncation downstream of this position has been classified as pathogenic by our laboratory (c.11314C>T (p.Arg3772X)). The variant allele was found at a frequency of 4.1e-06 in 245594 control chromosomes. To our knowledge, no occurrence of c.10744G>T in individuals affected with Polycystic Kidney and Hepatic Disease and no experimental evidence demonstrating its impact on protein function have been reported. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as likely pathogenic.
Fulgent Genetics, Fulgent Genetics RCV002501020 SCV002796046 likely pathogenic Polycystic kidney disease 4 2022-01-18 criteria provided, single submitter clinical testing
Natera, Inc. RCV000781724 SCV002075502 likely pathogenic Autosomal recessive polycystic kidney disease 2017-03-16 no assertion criteria provided clinical testing

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