ClinVar Miner

Submissions for variant NM_138694.4(PKHD1):c.2853C>T (p.Thr951=)

gnomAD frequency: 0.00230  dbSNP: rs139815340
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000225884 SCV000291329 benign Autosomal recessive polycystic kidney disease 2024-01-31 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000250293 SCV000315793 likely benign not specified criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000250293 SCV000331013 benign not specified 2015-10-05 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000225884 SCV000464098 uncertain significance Autosomal recessive polycystic kidney disease 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000250293 SCV001339125 likely benign not specified 2020-03-16 criteria provided, single submitter clinical testing
Pars Genome Lab RCV001449647 SCV001652825 likely benign Polycystic kidney disease 4 2021-05-18 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV001706278 SCV004163600 likely benign not provided 2023-04-01 criteria provided, single submitter clinical testing PKHD1: BP4, BP7
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV001706278 SCV001926268 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001706278 SCV001969130 likely benign not provided no assertion criteria provided clinical testing
Natera, Inc. RCV000225884 SCV002081014 benign Autosomal recessive polycystic kidney disease 2017-06-30 no assertion criteria provided clinical testing

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