ClinVar Miner

Submissions for variant NM_144997.7(FLCN):c.1203dup (p.Ile402fs)

dbSNP: rs398124526
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000082623 SCV000329353 pathogenic not provided 2015-08-14 criteria provided, single submitter clinical testing The c.1203dupC variant in the FLCN gene causes a frameshift starting with codon Isoleucine 402, changes this amino acid to a Histidine residue and creates a premature Stop codon at position 54 of the new reading frame, denoted p.Ile402HisfsX54. This variant is predicted to cause loss of normal protein function either through protein truncation or nonsense-mediated mRNA decay.
Invitae RCV000807361 SCV000947409 pathogenic Birt-Hogg-Dube syndrome 2022-08-20 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 96473). This variant has not been reported in the literature in individuals affected with FLCN-related conditions. This variant is present in population databases (rs398124526, gnomAD 0.003%). This sequence change creates a premature translational stop signal (p.Ile402Hisfs*54) in the FLCN gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in FLCN are known to be pathogenic (PMID: 15852235).
Baylor Genetics RCV001292861 SCV001481542 pathogenic Familial spontaneous pneumothorax 2020-01-07 criteria provided, single submitter clinical testing This variant was determined to be pathogenic according to ACMG Guidelines, 2015 [PMID:25741868].
Baylor Genetics RCV000807361 SCV004183420 pathogenic Birt-Hogg-Dube syndrome 2023-11-15 criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000082623 SCV000114665 pathogenic not provided 2013-02-28 no assertion criteria provided clinical testing

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