ClinVar Miner

Submissions for variant NM_145886.4(PIDD1):c.202_203del (p.Arg68fs)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003331880 SCV004037843 pathogenic Intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly 2023-08-31 criteria provided, single submitter clinical testing Variant summary: LRDD (also known as PIDD1) c.202_203delCG (p.Arg68SerfsX94) results in a premature termination codon, predicted to cause a truncation of the encoded protein or absence of the protein due to nonsense mediated decay, which are commonly known mechanisms for disease. The variant allele was found at a frequency of 2e-05 in 249608 control chromosomes (gnomAD). To our knowledge, no occurrence of c.202_203delCG in individuals affected with Intellectual Developmental Disorder, Autosomal Recessive 75, With Neuropsychiatric Features And Variant Lissencephaly and no experimental evidence demonstrating its impact on protein function have been reported. No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as pathogenic.

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