ClinVar Miner

Submissions for variant NM_152383.5(DIS3L2):c.2240A>G (p.Lys747Arg)

gnomAD frequency: 0.00002  dbSNP: rs1193786415
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001049075 SCV001213109 uncertain significance Perlman syndrome 2023-04-15 criteria provided, single submitter clinical testing This sequence change replaces lysine, which is basic and polar, with arginine, which is basic and polar, at codon 747 of the DIS3L2 protein (p.Lys747Arg). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt DIS3L2 protein function. ClinVar contains an entry for this variant (Variation ID: 845908). This variant has not been reported in the literature in individuals affected with DIS3L2-related conditions. This variant is present in population databases (no rsID available, gnomAD 0.02%).
Ambry Genetics RCV003346279 SCV004060871 uncertain significance Inborn genetic diseases 2023-08-22 criteria provided, single submitter clinical testing The c.2240A>G (p.K747R) alteration is located in exon 18 (coding exon 17) of the DIS3L2 gene. This alteration results from a A to G substitution at nucleotide position 2240, causing the lysine (K) at amino acid position 747 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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