ClinVar Miner

Submissions for variant NM_152564.5(VPS13B):c.5501C>T (p.Ser1834Leu)

gnomAD frequency: 0.00213  dbSNP: rs144257406
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000081904 SCV000113839 benign not specified 2013-10-11 criteria provided, single submitter clinical testing
Center for Pediatric Genomic Medicine, Children's Mercy Hospital and Clinics RCV000224363 SCV000281137 benign not provided 2015-06-05 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000335614 SCV000470813 likely benign Cohen syndrome 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Invitae RCV000335614 SCV000630877 benign Cohen syndrome 2024-02-01 criteria provided, single submitter clinical testing
Ambry Genetics RCV002311683 SCV000847003 benign Inborn genetic diseases 2017-04-04 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
GeneDx RCV000224363 SCV001837002 benign not provided 2019-03-17 criteria provided, single submitter clinical testing
Natera, Inc. RCV000335614 SCV001456857 benign Cohen syndrome 2020-09-16 no assertion criteria provided clinical testing

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