ClinVar Miner

Submissions for variant NM_152564.5(VPS13B):c.7647C>T (p.Phe2549=)

gnomAD frequency: 0.00066  dbSNP: rs112634620
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000390959 SCV000332716 uncertain significance not provided 2015-07-16 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001079204 SCV000630886 likely benign Cohen syndrome 2024-01-25 criteria provided, single submitter clinical testing
Ambry Genetics RCV002401976 SCV002670575 likely benign Inborn genetic diseases 2017-12-20 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
PreventionGenetics, part of Exact Sciences RCV003939947 SCV004751889 likely benign VPS13B-related disorder 2020-10-12 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Natera, Inc. RCV001079204 SCV001460979 likely benign Cohen syndrome 2020-09-16 no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000390959 SCV001978823 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000390959 SCV001979957 likely benign not provided no assertion criteria provided clinical testing

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