ClinVar Miner

Submissions for variant NM_152564.5(VPS13B):c.921G>A (p.Met307Ile)

gnomAD frequency: 0.00041  dbSNP: rs140709787
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001247141 SCV001420548 likely benign Cohen syndrome 2024-01-08 criteria provided, single submitter clinical testing
GeneDx RCV001751502 SCV001996759 uncertain significance not provided 2022-12-08 criteria provided, single submitter clinical testing Has not been previously published as pathogenic or benign to our knowledge; In silico analysis, which includes protein predictors and evolutionary conservation, supports that this variant does not alter protein structure/function
Fulgent Genetics, Fulgent Genetics RCV001247141 SCV002816339 uncertain significance Cohen syndrome 2021-10-07 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003938578 SCV004749114 likely benign VPS13B-related disorder 2023-02-22 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Ambry Genetics RCV004679041 SCV005174709 likely benign Inborn genetic diseases 2024-06-11 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Natera, Inc. RCV001247141 SCV002079452 uncertain significance Cohen syndrome 2020-01-24 no assertion criteria provided clinical testing

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