ClinVar Miner

Submissions for variant NM_152594.3(SPRED1):c.922T>A (p.Ser308Thr)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001235078 SCV001407743 uncertain significance Legius syndrome 2019-08-06 criteria provided, single submitter clinical testing This sequence change replaces serine with threonine at codon 308 of the SPRED1 protein (p.Ser308Thr). The serine residue is highly conserved and there is a small physicochemical difference between serine and threonine. This variant is present in population databases (rs765841849, ExAC 0.009%). This variant has not been reported in the literature in individuals with SPRED1-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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